What a Nonprofit Accountant Does and Why Nonprofits Need One

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Published on
January 27, 2026

Many nonprofits don’t necessarily start out thinking they’ll need a nonprofit accountant. 

Early on, financial work may be handled by a staff member who’s comfortable with numbers, a volunteer with business experience, or a founder handling bookkeeping after hours.

As long as donations are coming in and bills are getting paid, that approach can feel workable. For a while, it often is.

As an organization grows, though, things tend to get more complicated. Grants have detailed reporting rules. Donors place restrictions on how their contributions can be used. Board members want clearer answers about program costs and cash flow. Auditors and funders expect consistent records.

That’s usually when organizations start looking for someone who can bring structure and clarity to the financial side without pulling attention away from the mission. A nonprofit accountant understands how nonprofit finances actually work. 

What Is a Nonprofit Accountant?

A nonprofit accountant works with organizations that operate under tax-exempt status and rely on funding that often comes with conditions attached. This role goes beyond basic bookkeeping and examines how money flows through the organization as a whole.

Nonprofits don’t measure success by profit. Instead, they manage donations, grants, program revenue, and funds that may only be used for specific purposes or within certain timeframes.

An accountant for a nonprofit organization helps make sure those funds are recorded correctly and reported in a way that reflects how the organization operates. They’re familiar with fund accounting, nonprofit financial statements, as well as the accounting standards that apply to tax-exempt organizations.

More importantly, they understand how those standards affect everyday decisions, like grant reporting, audits, and board oversight.

When financial records are accurate, organizations are in a much better position to answer questions, meet reporting expectations, and avoid issues that arise when finances feel pieced together.

Key Responsibilities of a Nonprofit Accountant

A nonprofit accountant does much more than tidy the books. Their role is to ensure financial information is accurate and useful to the people who rely on it.

On the revenue side, they record donations and grants in a way that reflects how the funds can be used. For example, some grants are conditional. Others are reimbursement-based or restricted to certain programs or time periods. If revenue is recognized too early or too late, or placed in the wrong category, it can skew financial statements and create problems with grant reporting or future funding.

Expenses need the same level of attention. A nonprofit accountant ensures that spending is properly categorized between program services, management and general, and fundraising.

That functional breakdown matters for Form 990 filings, audits, and funder reports. It also shapes how donors and board members view the organization’s financial health.

Nonprofit accountants also oversee the month-end close, reconcile bank and credit card accounts, and help maintain internal controls. These routines catch issues early and maintain consistent financial information from one period to the next.

Clear, accurate financial statements give leadership and the board a realistic picture of cash flow, reserves, and program costs without requiring anyone to dig through spreadsheets to find answers.

The Hidden Cost of “Good Enough” Books & Why You Need a Qualified Nonprofit Accountant

You may think your books are “good enough,” but many organizations don’t know they may be missing something vital that will cause chaos down the road. A qualified accountant can help you lower risks by looking at the following:

Financial & Compliance Risks Without a Nonprofit Accountant

For a lot of nonprofits, problems don’t show up as emergencies. The numbers don’t look alarming. Reports are still being shared. No one is sounding the alarm. It’s easy to assume everything’s fine, even though cracks may already be forming.

Where issues usually show up is in how money is categorized and tracked over time. A restricted gift gets lumped in with general funds. A grant gets recognized before the requirements are fully met. None of that always causes immediate trouble, but little inconsistencies like this can quietly throw reports off.

Nonprofit accounting rules exist for a reason, and they’re easy to get wrong if no one is actively watching for them. When those rules aren’t applied consistently, the gaps tend to show up later, often during an audit or a major funding review. 

At that point, fixing the records is more stressful and more expensive than anyone expects.

Donor restrictions add pressure, too. If you can’t clearly show how specific funds were used, even unintentionally, it can raise questions. Trust can erode quickly when financial answers feel unclear or incomplete.

Oversight matters as well. Without regular review and clear checks, small errors slip through. Over time, those errors stack up, especially when grants, filings, and public reporting are involved. Nothing may feel urgent day to day, but the risk builds quietly in the background.

Operational & Strategic Risks Without Proper Accounting

When accounting systems aren’t well-structured, the impact extends beyond the finance function. Leadership and boards rely on timely, accurate financial information to make decisions about staffing, programs, and budgets.

When reports are delayed or unclear, those decisions are made with limited visibility. This can lead to overspending, cash flow strain, or adjustments that could have been avoided with better information.

Spending trends may not be visible until after they begin affecting cash reserves. Questions about available funds often require follow-up instead of clear answers in the moment.

Account structure also plays a key role. If the chart of accounts does not align with programs, grants, and funding sources, reports become harder to use. Staff may need to build supplemental spreadsheets to track grant activity or prepare board reports, which adds time and increases the risk of inconsistencies.

Planning becomes more reactive when financial data does not support forecasting. Delayed grants, seasonal fundraising shifts, or unexpected expenses feel more disruptive without a clear picture of upcoming obligations and available resources.

Over time, these challenges affect daily operations. Time is spent correcting entries, clarifying reports, and tracking down information that should already be accessible. That added effort pulls focus away from program work and strategic priorities and places unnecessary strain on staff and leadership.

Reputational & Donor Risks Nonprofit Accountants Help Avoid

For nonprofits, financial trust builds slowly and can erode faster than expected. Donors and funders want to know that money is handled carefully and that reports reflect what’s really happening.

When financial information comes in late or looks different from one report to the next, people notice. Grantmakers may ask more questions. Donors may hesitate before renewing support. Even small inconsistencies can create doubt, especially when reporting expectations are high.

Audit results can raise similar concerns. One adjustment isn’t unusual, but recurring issues year after year often point to gaps in systems or oversight. Over time, that pattern can affect credibility with funders and partners.

Inside the organization, unclear finances add pressure. Staff and board members spend time tracking down answers that should already be available. That distraction pulls attention away from programs and planning and can wear people down over time.

Cost & Efficiency Benefits of Working With a Nonprofit Accountant

Cost concerns can delay hiring professional accounting support. But, in reality, operating without proper accounting can cost much more in the long run.

Cleanup projects, audit corrections, and emergency consulting can be expensive. Fixing months or years of inaccurate records takes a great deal of time and effort. Meanwhile, staff spend hours tracking down numbers, searching for documents, or reconciling conflicting reports.

Technology issues add to the cost. Accounting software, bill pay platforms, payroll systems, and donor tools help only when they’re set up correctly and used consistently. When they’re not, organizations end up duplicating work and struggling with messy reports.

A nonprofit accountant helps make sure that processes are documented and systems are properly configured. Consistency is especially valuable during staff transitions, as it helps keep operations running smoothly.

Why Working With a Qualified Nonprofit Accountant Is Worth It

A qualified nonprofit accountant brings structure to an area that touches every part of the organization. They help ensure financial information is reliable, so leaders can make decisions with confidence, not guesswork.

Accurate records and regular reporting make it easier to respond to funder requests and answer board questions. Plus, it’s easier to navigate audits without stress or panic. Leadership gets a clearer view of financial trends, cash flow, and program costs.

Over time, this kind of clarity changes how an organization operates. Instead of reacting to financial surprises, teams can plan ahead, adjust thoughtfully, and invest resources where they matter most. Strong accounting supports the organizational mission by providing a stable financial foundation.

FAQs

How Is Nonprofit Accounting Different From Regular Accounting?

Nonprofit accounting focuses on accountability rather than profit. It tracks funds by purpose, manages donor restrictions, and follows nonprofit-specific standards. Financial statements are designed to show how resources support the mission rather than generate earnings.

Do Small Nonprofits Really Need a Nonprofit Accountant?

Many small nonprofits benefit from a nonprofit accountant, especially when grants, board reporting, or multiple funding sources are involved. Establishing strong accounting systems early helps reduce risk and prevents costly problems as the organization grows.

What Software Do Nonprofit Accountants Typically Use?

QuickBooks Online is commonly used, often paired with payroll, bill pay, and donor management tools. The software itself matters less than how it’s set up and maintained. A nonprofit accountant ensures systems support accurate reporting and compliance.

Does Working With a Nonprofit Accountant Make Audits Easier?

Yes. When a nonprofit accountant keeps records accurate and up to date throughout the year, audits tend to move faster and feel far less stressful. Auditors can rely on consistent documentation, clear reconciliations, and well-prepared reports, which often reduces follow-up questions, delays, and unexpected adjustments.

Is Hiring a Nonprofit Accountant Expensive?

Costs can vary depending on your organization’s size and financial complexity. Many nonprofits find that working with a nonprofit accountant actually saves money over time by reducing cleanup work, avoiding compliance issues, and preventing costly errors that surface during audits or grant reviews.

Final Thoughts

Nonprofits operate in an environment where trust, transparency, and accountability matter every day. Financial systems play a central role in supporting those values.

A nonprofit accountant helps ensure financial information is accurate, compliant, and useful. With strong accounting in place, organizations are better equipped to protect funding, support programs, and plan for long-term impact.

When the financial foundation is solid, leadership can spend less time worrying about numbers and more time advancing the mission. If you’re ready to strengthen your nonprofit’s financial systems, Complete Balance Accounting & Consulting can help. Reach out anytime to get started.

About The Author

Christina Wolfrom

Christina Wolfrom is the owner and lead CPA at Complete Balance Accounting & Consulting. Before opening her own firm, Christina spent 15 years working for top-25 accounting firms, working alongside some of the best CPAs in the country and gaining a wealth of knowledge. During that time, she saw a critical gap in accounting services—businesses were often left choosing between DIY bookkeeping, automated services, or large firms that couldn't provide the personalized attention they needed. Christina founded her firm to fill that gap, offering small businesses top-tier, hands-on accounting services. She is committed to working closely with business owners, providing expert financial guidance tailored to their unique needs and goals.

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